CRAN/E | R Packages from Thomas Lumley

Thomas Lumley

Author of 34 R packages

Quick info

Thomas Lumley has worked on 34 packages so far. In total, Thomas Lumley has worked with 125 other authors on those packages. This amount of teamwork is mind-blowing! A true legend.

Packages overview

DHBins
MonetDB.R
acepack
bigQF
biglm
biglmm
date
dbglm
dichromat
distcomp
ebmstate
eechidna
forestplot
gdata
gmodels
gplots
gtools
hextri
mitools
mixgb
optimall
rigr
rimu
riskscores
rmeta
sandwich
srvyr
sumFREGAT
survey
survival
svyVGAM
svylme
syn
xkcdcolors

Package details

DHBins

Hexmaps for NZ District Health Boards

Thomas Lumley

MonetDB.R

Connect MonetDB to R

Mitchell Weggemans , Hannes Muehleisen , Anthony Damico , Thomas Lumley

acepack

ACE and AVAS for Selecting Multiple Regression Transformations

Phil Spector , Jerome Friedman , Robert Tibshirani , Thomas Lumley , Shawn Garbett , Jonathan Baron

bigQF

Quadratic Forms in Large Matrices

Thomas Lumley

biglm

Bounded Memory Linear and Generalized Linear Models

Thomas Lumley

biglmm

Bounded Memory Linear and Generalized Linear Models

Thomas Lumley , Christophe Dutang , Alan Miller , Morven Gentleman , Mark Purver

date

Functions for Handling Dates

Terry Therneau , Thomas Lumley , Kjetil Halvorsen , Kurt Hornik , R Core Team

dbglm

Generalised Linear Models by Subsampling and One-Step Polishing

Thomas Lumley , Shangqing Cao

dichromat

Color Schemes for Dichromats

Thomas Lumley , Ken Knoblauch , Scott Waichler , Achim Zeileis

distcomp

Computations over Distributed Data without Aggregation

Balasubramanian Narasimhan , Marina Bendersky , Sam Gross , Terry M. Therneau , Thomas Lumley

ebmstate

Empirical Bayes Multi-State Cox Model

Rui Costa , Moritz Gerstung , Terry M Therneau , Thomas Lumley , Hein Putter , Liesbeth de Wreede , Marta Fiocco , Ronald Geskus

eechidna

Exploring Election and Census Highly Informative Data Nationally for Australia

Jeremy Forbes , Di Cook , Anthony Ebert , Heike Hofmann , Rob Hyndman , Thomas Lumley , Ben Marwick , Carson Sievert , Mingzhu Sun , Dilini Talagala , Nicholas Tierney , Nathaniel Tomasetti , Earo Wang , Fang Zhou , Commonwealth of Australia AEC , Australian Bureau of Statistics ABS

forestplot

Advanced Forest Plot Using 'grid' Graphics

Max Gordon , Thomas Lumley

gdata

Various R Programming Tools for Data Manipulation

Gregory R. Warnes , Gregor Gorjanc , Arni Magnusson , Liviu Andronic , Jim Rogers , Don MacQueen , Ales Korosec , Ben Bolker , Michael Chirico , Gabor Grothendieck , Thomas Lumley , Brian Ripley , inoui llc

gmodels

Various R Programming Tools for Model Fitting

Gregory R. Warnes , Ben Bolker , Thomas Lumley , Randall C. Johnson , Airel Muldoon , Nitin Jain , Dirk Enzmann , Søren Højsgaards , Ulrich Halekoh , Mark Schwartz , Jim Rogers

gplots

Various R Programming Tools for Plotting Data

Gregory R. Warnes , Ben Bolker , Lodewijk Bonebakker , Robert Gentleman , Wolfgang Huber , Andy Liaw , Thomas Lumley , Martin Maechler , Arni Magnusson , Steffen Moeller , Marc Schwartz , Bill Venables , Tal Galili

gtools

Various R Programming Tools

Gregory R. Warnes , Ben Bolker , Thomas Lumley , Arni Magnusson , Bill Venables , Genei Ryodan , Steffen Moeller , Ian Wilson , Mark Davis , Nitin Jain , Scott Chamberlain

hextri

Hexbin Plots with Triangles

Thomas Lumley

mitools

Tools for Multiple Imputation of Missing Data

Thomas Lumley

mixgb

Multiple Imputation Through 'XGBoost'

Yongshi Deng , Thomas Lumley

optimall

Allocate Samples Among Strata

Jasper Yang , Pamela Shaw , Bryan Shepherd , Thomas Lumley , Gustavo Amorim

rigr

Regression, Inference, and General Data Analysis Tools in R

Amy D Willis , Taylor Okonek , Charles J Wolock , Brian D Williamson , Scott S Emerson , Andrew J Spieker , Yiqun T Chen , Travis Y Hee Wai , James P Hughes , R Core Team , Akhil S Bhel , Thomas Lumley

rimu

Responses in Multiplex

Thomas Lumley , Annie Cohen

riskscores

Optimized Integer Risk Score Models

Hannah Eglinton , Alice Paul , Oscar Yan , R Core Team , Robert Gentleman , Ross Ihaka , Simon Davies , Thomas Lumley

rmeta

Meta-Analysis

Thomas Lumley

sandwich

Robust Covariance Matrix Estimators

Achim Zeileis , Thomas Lumley , Nathaniel Graham , Susanne Koell

srvyr

'dplyr'-Like Syntax for Summary Statistics of Survey Data

Greg Freedman Ellis , Thomas Lumley , Tomasz Żółtak , Ben Schneider , Pavel N. Krivitsky

sumFREGAT

Fast Region-Based Association Tests on Summary Statistics

Nadezhda M. Belonogova , Gulnara R. Svishcheva with contributions from: Seunggeun Lee , Pierre Lafaye de Micheaux , Thomas Lumley , Minghui Wang , Yiyuan Liu , Shizhong Han , Yaowu Liu , James O. Ramsay , Xihao Li , Zilin Li , Han Chen

survey

Analysis of Complex Survey Samples

Thomas Lumley , Peter Gao , Ben Schneider

survival

Survival Analysis

Terry M Therneau , Thomas Lumley , Atkinson Elizabeth , Crowson Cynthia

svyVGAM

Design-Based Inference in Vector Generalised Linear Models

Thomas Lumley

svylme

Linear Mixed Models for Complex Survey Data

Thomas Lumley

syn

Creates Synonyms From Target Words

Nicholas Tierney , Amy Stringer , Mike Cheng , Laura de Jong , Thomas Lumley

xkcdcolors

Color Names from the XKCD Color Survey

Thomas Lumley , using data from Randall Munroe , about 2.2e5 survey participants

Colleagues

Mitchell Weggemans
Hannes Muehleisen
Anthony Damico
Phil Spector
Jerome Friedman
Robert Tibshirani
Shawn Garbett
Jonathan Baron
Christophe Dutang
Alan Miller
Morven Gentleman
Mark Purver
Terry Therneau
Kjetil Halvorsen
Kurt Hornik
R Core Team
Shangqing Cao
Ken Knoblauch
Scott Waichler
Achim Zeileis
Balasubramanian Narasimhan
Marina Bendersky
Sam Gross
Terry M. Therneau
Rui Costa
Moritz Gerstung
Terry M Therneau
Hein Putter
Liesbeth de Wreede
Marta Fiocco
Ronald Geskus
Jeremy Forbes
Di Cook
Anthony Ebert
Heike Hofmann
Rob Hyndman
Ben Marwick
Carson Sievert
Mingzhu Sun
Dilini Talagala
Nicholas Tierney
Nathaniel Tomasetti
Earo Wang
Fang Zhou
Commonwealth of Australia AEC
Australian Bureau of Statistics ABS
Max Gordon
Gregory R. Warnes
Gregor Gorjanc
Arni Magnusson
Liviu Andronic
Jim Rogers
Don MacQueen
Ales Korosec
Ben Bolker
Michael Chirico
Gabor Grothendieck
Brian Ripley
inoui llc
Randall C. Johnson
Airel Muldoon
Nitin Jain
Dirk Enzmann
Søren Højsgaards
Ulrich Halekoh
Mark Schwartz
Lodewijk Bonebakker
Robert Gentleman
Wolfgang Huber
Andy Liaw
Martin Maechler
Steffen Moeller
Marc Schwartz
Bill Venables
Tal Galili
Genei Ryodan
Ian Wilson
Mark Davis
Scott Chamberlain
Yongshi Deng
Jasper Yang
Pamela Shaw
Bryan Shepherd
Gustavo Amorim
Amy D Willis
Taylor Okonek
Charles J Wolock
Brian D Williamson
Scott S Emerson
Andrew J Spieker
Yiqun T Chen
Travis Y Hee Wai
James P Hughes
Akhil S Bhel
Annie Cohen
Hannah Eglinton
Alice Paul
Oscar Yan
Ross Ihaka
Simon Davies
Nathaniel Graham
Susanne Koell
Greg Freedman Ellis
Tomasz Żółtak
Ben Schneider
Pavel N. Krivitsky
Nadezhda M. Belonogova
Gulnara R. Svishcheva with contributions from: Seunggeun Lee
Pierre Lafaye de Micheaux
Minghui Wang
Yiyuan Liu
Shizhong Han
Yaowu Liu
James O. Ramsay
Xihao Li
Zilin Li
Han Chen
Peter Gao
Atkinson Elizabeth
Crowson Cynthia
Amy Stringer
Mike Cheng
Laura de Jong
using data from Randall Munroe
about 2.2e5 survey participants